Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950468.1_cds_XP_016490899.1_81276
CDS Infomation

[gene=LOC107810614] [db_xref=GeneID:107810614] [protein=probable U3 small nucleolar RNA-associated protein 7] [protein_id=XP_016490899.1] [location=complement(join(10020..11042,11246..11294,12209..12276,12632..12750,13134..13272,13484..13573,13687..13737))] [gbkey=CDS]
Sequence

ATGGATATGAAAGTAAAGAAATACCTTAGAGGTGAAGGAGCAAATTTGGAGGCATTGAAG
GACAAAAAATTAAAGGGTCAGCTTGCTGTGAAAGAAGAGTTGTATGGAAAATCTGCAACA
GCTGCTGCGAAGGCTGAGAAGTGGCTTATGCCAAGTGAGGGTGGCTATCTAGAGGTTGAT
GATAAAGGTATTGAGAAGACATGGAGAATAAAGCAAGAGGCAATTGCCCGTGAAGTTGAC
ATTTTGAGCTCTAGGAAACAATATGATATCGTCTTACCAGATTTTGGTCCTTACACTCTT
GAATTCACCCCTAGCGGTCGCTACATGGCTGCAGCTGGACGCAAAGGTCACCTTGCTATT
GTAGATATGAAAAACATGAAACTCGTTAAAGAACTGCAGGTCAGGGAAACGGTGCGTGAT
GTAATATTCTTGCATAATGAACAATTTTTTGCTGCTGCTCAAAAGAAGTACCCATATATA
TACAATAGAGATGGCACAGAGCTCCACTGCCTGAAGGAGCATGGTGCTGTGCTAAAGCTT
CAGTTCTTAAGGAATCACTTCCTTTTGGCTTCTATTAACAAATTTGGTCAGCTCCATTAT
CAGGATGTCACTACTGGACAGATGGTAGGTAATCTTCGAACTGGCTTGGGCCGTACTGAT
GTGATGCAGGTGAATCCCTTCAACAGTGTGGTTGCTGTCGGCCATTCTGGTGGAACAGTC
AGCATGTGGAAGCCTACAAGCGCTGCTCCCCTAGTGAAAATGCTCTGTCATCCTGGACCA
GTCACTGCTCTTGCATTCCATTCTAACGGCCATCTAATGGCAACCGCTGGTATGGAGAGG
AAAATAAAGATTTGGGATTTGAGGAAGTTTGAGGTTCTCCAAACCTTACCAGGACATTGC
AAGGCCTTGGATTTTAGTCAAAAAGGTTTACTTGCTGCTGCAACCGGATCTTTCGTACAA
GTTTTTGGAGATCTTTCTGGATCTCAGAATTATAGCCGTTATATGAATCATTCTATTGCG
AAAGGATACCAAGTAAAGAAGGTGGCGTTCAGACCATATGAAGACGTTCTAGGCATAGGG
CATTCTATGGGTTGGTCTTCTATCTTAATTCCAGGATCCGGAGAACCCAACTTCGATTCT
TGGGTGGCAAATCCATTCGAAACATCTAAACAAAGGAGAGAGAAGGAAGTCCGCTCTCTT
CTTGACAAGCTTCCTCCAGAGACTATCATGTTAGATCCTACAAAGATTGGTACAGTGAGG
TCAACAAGAAAGAAGGAACAGCCAACAAAGGAGGATAAAGAAGCTGAAATGGAAGCTGCT
ATTGAGGAAGCTAAAAGTATGCCTATGAAGAAGAAAACAAAAGGTAGAAGCAAGCCGAGT
AAGATTGCAAAGAAGAAGCAAGAAGCTGTCGAGAAAGCTAAGAAGCCGTTCCTGGAGCAA
CAGATGAATGAATTCTCCAAGAAAAGGAAACTCACCGAGGAAACTCAGCTTCCAAAATCT
TTAGAGCGTTTCGTTAGGAAGAAGGCAGTAGTAGCATGA

Peptide Sequence

PEP ID

XP_016490899.1
PEP Infomation

PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Nicotiana tabacum]
Sequence

MDMKVKKYLRGEGANLEALKDKKLKGQLAVKEELYGKSATAAAKAEKWLMPSEGGYLEVD
DKGIEKTWRIKQEAIAREVDILSSRKQYDIVLPDFGPYTLEFTPSGRYMAAAGRKGHLAI
VDMKNMKLVKELQVRETVRDVIFLHNEQFFAAAQKKYPYIYNRDGTELHCLKEHGAVLKL
QFLRNHFLLASINKFGQLHYQDVTTGQMVGNLRTGLGRTDVMQVNPFNSVVAVGHSGGTV
SMWKPTSAAPLVKMLCHPGPVTALAFHSNGHLMATAGMERKIKIWDLRKFEVLQTLPGHC
KALDFSQKGLLAAATGSFVQVFGDLSGSQNYSRYMNHSIAKGYQVKKVAFRPYEDVLGIG
HSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVRSLLDKLPPETIMLDPTKIGTVR
STRKKEQPTKEDKEAEMEAAIEEAKSMPMKKKTKGRSKPSKIAKKKQEAVEKAKKPFLEQ
QMNEFSKKRKLTEETQLPKSLERFVRKKAVVA

Transcript Sequence

Gene sequence data has not been registered.